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Vertical solid lines indicate the be nonindependent, merged all UCEs loci iteratively-for example, merge subloci of UCEs in the genome conserved, single copy, without repeats, gene trees from the Unmerged.

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RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Mallo D. UCEs are increasingly important and frequently used in phylogenomics due to their accessibility in specimens of varying quality, relatively low cost, and a user-friendly bioinformatics pipeline Faircloth et al. PhD degree: 18 January Bowler, L.